Media Summary: In this video Daniel J.B. Clarke from the Ma'ayan Lab at the Icahn School of Medicine at Mount Sinai describes what is an In this IDG Toolfest presentation, Daniel Clarke from the Ma'ayan Lab gives a quick Gene expression profiling of bulk or single cells with RNA-seq is now the most common method to profile gene expression at the ...

Introduction To Developing Appyters - Detailed Analysis & Overview

In this video Daniel J.B. Clarke from the Ma'ayan Lab at the Icahn School of Medicine at Mount Sinai describes what is an In this IDG Toolfest presentation, Daniel Clarke from the Ma'ayan Lab gives a quick Gene expression profiling of bulk or single cells with RNA-seq is now the most common method to profile gene expression at the ... Protein kinases play a key role in most cellular processes, and their aberrant activity has been recognized as a cause of many ... Gene set enrichment analysis is a computational method that enables the identification of underlying biological functions and ... The Harmonizome provides a collection of processed datasets gathered to serve and mine knowledge about genes and proteins ...

In this IDG Toolfest presentation, Sherry Xie from the Ma'ayan Lab gives a quick In this 15 minutes presentation Eryk Kropiwnicki from the Ma'ayan Lab discusses Although there are bioinformatics tools developed to compare gene sets, important features such as p-value calculation and links ... Abstract Jupyter Notebooks have transformed the communication of data analysis pipelines by facilitating a modular structure that ... A wealth of data from multitude of sources is readily available for thousands of bioactive small molecules. This information could ... RNA-Seq technology has enabled the generation of massive amounts of gene expression data, much of which is publicly ...

Most biomedical researchers face a barrier in executing computational pipelines to analyze and visualize their data. It is therefore ...

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Introduction to Developing Appyters
Quick Introduction to Appyters by Daniel Clarke
Appyters for the Analysis and Visualization of RNA-seq and scRNA-seq
The KINOMEscan and KEA3 Appyters
Enrichr Visualization Appyters
Appyters to Extract, Transform, and Load (ETL) Data for the Harmonizome
Quick Introduction to 3 Gene Reverse Search Appyters by Sherry Xie
Appyters Crash Course for the IDG Hackathon
Gene Set Comparison Appyter
Appyter for Visualization and Characterization of Cancer Patient Clusters based on RNA-Seq Profiles
Appyter used in 3 Case Studies - IDG Digital Tool Fest 2021
Running the Tumor Target Screener Appyter in CAVATICA (Finding Targets from RNA-seq Samples)
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Introduction to Developing Appyters

Introduction to Developing Appyters

In this video Daniel J.B. Clarke from the Ma'ayan Lab at the Icahn School of Medicine at Mount Sinai describes what is an

Quick Introduction to Appyters by Daniel Clarke

Quick Introduction to Appyters by Daniel Clarke

In this IDG Toolfest presentation, Daniel Clarke from the Ma'ayan Lab gives a quick

Sponsored
Appyters for the Analysis and Visualization of RNA-seq and scRNA-seq

Appyters for the Analysis and Visualization of RNA-seq and scRNA-seq

Gene expression profiling of bulk or single cells with RNA-seq is now the most common method to profile gene expression at the ...

The KINOMEscan and KEA3 Appyters

The KINOMEscan and KEA3 Appyters

Protein kinases play a key role in most cellular processes, and their aberrant activity has been recognized as a cause of many ...

Enrichr Visualization Appyters

Enrichr Visualization Appyters

Gene set enrichment analysis is a computational method that enables the identification of underlying biological functions and ...

Sponsored
Appyters to Extract, Transform, and Load (ETL) Data for the Harmonizome

Appyters to Extract, Transform, and Load (ETL) Data for the Harmonizome

The Harmonizome provides a collection of processed datasets gathered to serve and mine knowledge about genes and proteins ...

Quick Introduction to 3 Gene Reverse Search Appyters by Sherry Xie

Quick Introduction to 3 Gene Reverse Search Appyters by Sherry Xie

In this IDG Toolfest presentation, Sherry Xie from the Ma'ayan Lab gives a quick

Appyters Crash Course for the IDG Hackathon

Appyters Crash Course for the IDG Hackathon

In this 15 minutes presentation Eryk Kropiwnicki from the Ma'ayan Lab discusses

Gene Set Comparison Appyter

Gene Set Comparison Appyter

Although there are bioinformatics tools developed to compare gene sets, important features such as p-value calculation and links ...

Appyter for Visualization and Characterization of Cancer Patient Clusters based on RNA-Seq Profiles

Appyter for Visualization and Characterization of Cancer Patient Clusters based on RNA-Seq Profiles

The Patient Cohorts RNA-Seq Viewer

Appyter used in 3 Case Studies - IDG Digital Tool Fest 2021

Appyter used in 3 Case Studies - IDG Digital Tool Fest 2021

Case Study with

Running the Tumor Target Screener Appyter in CAVATICA (Finding Targets from RNA-seq Samples)

Running the Tumor Target Screener Appyter in CAVATICA (Finding Targets from RNA-seq Samples)

The aim of the Tumor Target Screener

dkNET Webinar - Appyters: Turning Jupyter Notebooks Into Data-Driven Web Apps 05282021

dkNET Webinar - Appyters: Turning Jupyter Notebooks Into Data-Driven Web Apps 05282021

Abstract Jupyter Notebooks have transformed the communication of data analysis pipelines by facilitating a modular structure that ...

Drugmonizome-ML: An Appyter for Predicting Drug Indications

Drugmonizome-ML: An Appyter for Predicting Drug Indications

A wealth of data from multitude of sources is readily available for thousands of bioactive small molecules. This information could ...

An introduction to new approach methodologies

An introduction to new approach methodologies

Using traditional animal models, drug

The Gene Centric GEO Reverse Search Appyter

The Gene Centric GEO Reverse Search Appyter

RNA-Seq technology has enabled the generation of massive amounts of gene expression data, much of which is publicly ...

Appyters: Turning Jupyter Notebooks into Data Driven Web Apps

Appyters: Turning Jupyter Notebooks into Data Driven Web Apps

Most biomedical researchers face a barrier in executing computational pipelines to analyze and visualize their data. It is therefore ...